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Publications – M.Sc. Michael Knopp


  • Bremer N, Knopp M, Martin WF, Tria FDK: Realistic gene transfer to gene duplication ratios identify different roots in the bacterial phylogeny using a tree reconciliation method. Life 12:995 (2022). PDF
  • Fan L, Wu D, Goremykin V, Trost K, Knopp M, Zhang C, Martin WF, Zhu R: Reply to: Phylogenetic affiliation of mitochondria with alpha-II and rickettsiales is an artefact. Nat Ecol Evol 6:1832-1835 (2022). doi: 10.1038/s41559-022-01896-8


  • Tria FDK, Brueckner J, Skejo J, Xavier JC, Kapust N, Knopp M, Wimmer JLE, Nagies FSP, Zimorski V, Gould SB, Garg SG, Martin WF: Gene duplications trace mitochondria to the onset of eukaryote complexity. Genome Biol Evol 13:evab055 (2021). doi: 10.1093/gbe/evab055 PDF
  • Garg SG, Kapust N, Lin W, Knopp M, Tria FDK, Nelson-Sathi S, Gould SB, Fan L, Zhu R, Zhang C, Martin WF: Anomalous phylogenetic behavior of ribosomal proteins in metagenome assembled asgard archaea. Genome Biol Evol 13:evaa238 (2021). doi: 10.1093/gbe/evaa238 PDF 


  • Gerlitz M, Knopp M, Kapust N, Xavier JC, Martin WF: Elusive data underlying debate at the prokaryote-eukaryote divide. Biol Direct 13:21 (2018). PDF
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